Main contents
- High-throughput sequencing data.
- Quality assessment (fastQC, others).
- Reference alignment: Tuxedo.
- Metagenomics: multiple references alignment.
- Epigenomics: ChiP-seq and others
- Population studies: CNV y GWAS.
Type: Mandatory
ECTS: 3
Semester: 2º
PDF sheet: Download.
Teachers
Alicia García (agarmar@usal.es)
Laura Durán (laudupri@usal.es)
Description
The student will acquire the skills to handle high-throughput sequencing data. Specifically, que will be able to evaluate the data quality, align them against reference genomes, evaluate the alignment quality, and determine the coverage.